hpotk.annotations.load.hpoa package

class hpotk.annotations.load.hpoa.SimpleHpoaDiseaseLoader(hpo: MinimalOntology, cohort_size: int = 50, salvage_negated_frequencies: bool = False)[source]

Bases: HpoDiseaseLoader

Loads HPO annotation file into HpoDiseases.

Any issues are reported via logger.

load(file: IO | str) → HpoDiseases[source]
property cohort_size: int